<!-- ```{include} ../README.md

```

```{toctree}
:hidden: true
:maxdepth: 1

api.md
changelog.md
contributing.md
references.md

notebooks/example
notebooks/100_cell_state_analysis
notebooks/200_tf_binding_network_construct
notebooks/300_regulation_inference
notebooks/400_regfactor_decomposition
notebooks/500_intracellular_cci

reproducibility.md
```-->


```{include} ./README.md

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## Important resources

```{eval-rst}
.. grid:: 3
    :gutter: 1

    .. grid-item-card:: About
        :link: about/index
        :link-type: doc

        Learn more about :mod:`scmagnify`.

    .. grid-item-card:: API
        :link: api/index
        :link-type: doc

        Find a detailed documentation of :mod:`scmagnify`.


    .. grid-item-card:: Tutorials
        :link: tutorials/index
        :link-type: doc

        Check out how to use :mod:`scmagnify` for data analysis.
```


```{toctree}
:hidden: true
:maxdepth: 3
:titlesonly: true

about/index
api/index
tutorials/index
changelog
contributing
references

```