Plotting#
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Plot top features per group as bar charts. |
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Plot ranked features per group with label annotations. |
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Plot a Circos plot for GRN analysis with an optional central embedding scatter plot. |
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Plot time series for genes as a heatmap. |
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Plot variable trends along a sorted dimension (e.g., pseudotime). |
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Plot a PairGrid of the top n-th genes with high-network scores, with isolated plotting parameters and italicized gene labels. |
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Plot the distribution of multiple parameters with thresholds on separate subplots. |
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Class for visualizing gene regulatory networks (GRNs) from GRNMuData objects. |
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A class to visualize genomic loci, including coverage tracks, gene annotations, and other genomic features. |