Models

MAGNI(data[, modal, layer, time_key, ...])	Class implementing Multi-Scale Gene Regulation Inference (MAGNI).
MSNGC(n_reg, n_target[, chrom_constraint, ...])	Generalised VAR (GVAR) model based on self-explaining neural networks, primarily based on the concepts described in [1]_.
partial_ordering(adata[, dyn, lag])	Computes the partial ordering of cells using diffusion operators from RNA velocity or pseudotime kernels.
chromatin_constraint(data[, modal, layer, ...])	Build chromatin constraints and import them into the analysis.
import_basalGRN(basal_grn, adata[, ...])	Import a provided basal GRN and align it to the given AnnData.